Package: ActiGlobe 0.2.2

C. William Yao

ActiGlobe: Wearable Recording Processor for Time Shift Adjustment and Data Analysis

Cross-continental travel and local practices of daylight saving time can induce time shift. When left unadjusted, it can lead to biases in interpreting wearable measures. This research tool streamlines data processing and analysis (e.g., cosinor analysis, circularized kernel density estimation) for longitudinal recordings. Together with additional features such as exporting daily wearable measures and creating visual reports, it aims to facilitate research on longitudinal wearable measurements. To learn its application, please refer to the provided vignettes for a brief tutorial. This tool is developed based on the methodology detailed in: Varesco, G. Yao, C. W., Dubé, E., Simonelli, G., Bieuzen, F., (2024) <doi:10.1113/ep092195>.

Authors:C. William Yao [aut, cre, cph], Giorgio Varesco [aut, ctb], François Bieuzen [aut, ctb], Guido Simonelli [aut, ctb, fnd]

ActiGlobe_0.2.2.tar.gz
ActiGlobe_0.2.2.zip(r-4.7-any)ActiGlobe_0.2.2.zip(r-4.6-any)ActiGlobe_0.2.2.zip(r-4.5-any)
ActiGlobe_0.2.2.tgz(r-4.6-any)ActiGlobe_0.2.2.tgz(r-4.5-any)
ActiGlobe_0.2.2.tar.gz(r-4.7-any)ActiGlobe_0.2.2.tar.gz(r-4.6-any)
ActiGlobe_0.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ActiGlobe/json (API)

# Install 'ActiGlobe' in R:
install.packages('ActiGlobe', repos = c('https://ropensci-staging.r-universe.dev', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #()

Bug tracker:https://github.com/cwy20030/actiglobe/issues

Pkgdown/docs site:https://cwy20030.github.io

Datasets:

On CRAN:

Conda:

accelerometeractigraphycircadian-rhythmpipelinereproducibilitysleep-research

4.95 score 5 stars 4 scripts 21 exports 43 dependencies

Last updated from:430c36a8ba. Checks:10 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develOK275
pkgdown docsOK189
source / vignettesOK275
linux-releaseOK242
macos-releaseOK163
macos-oldrelOK139
windows-develOK384
windows-releaseOK366
windows-oldrelOK293
wasm-releaseOK144

Exports:Act2Dailyboot.seciBriefSumCosinorMCosinorM.KDEDate2TotalTDateFormatDSTDST2GLggActiGlobeggCosinorMNum2UTCRad2HrTAdjustTimeFormatTravelLogTZ2UTCUTC2NumUTCwDSTwrite.actwrite.cosinor

Dependencies:bitbit64clicliprcpp11crayonfarvergenericsggplot2ggrepelgluegridExtragtablehmsisobandlabelinglatticelifecyclelubridatemagrittrpillarpkgconfigprettyunitsprogressR6RColorBrewerRcppreadrrlangS7sandwichscalestibbletidyselecttimechangetzdbutf8vctrsviridisviridisLitevroomwithrzoo

Circadian-Analysis
Cosinor Analysis | Single-phase Model (i.e., single phase circadian rhythm) | Traditional Cosinor Model fitted via Ordinary Least Sqaure (OLS) | Note | Econometry-modified Cosinor Model with Feasible General Least Square (FGLS) | Dual-phase Model (i.e., 12 + 24hour rhythms) | Ecnometry-modified Cosinor Model with Feasible General Least Sqaure (FGLS) | Gaussian Kernel Density Estimation on Circularized Time | Visualized Model Comparisons | OLS-Cosinor vs. Kernel Density Estimation
Rendered fromCircadian-Analysis.Rmdusingknitr::rmarkdown

Last update: 2026-01-26
Started: 2025-10-31

Graphic-Report
What will be covered in this tutorial? | Step 0: Pre-requisits | Step 1: Segment Daily Recordings | Visual Example of Segmented Daily Recording | Step 2: Export Daily Recordings | Step 3: Generate Daily Reports
Rendered fromGraphic-Report.Rmdusingknitr::rmarkdown

Last update: 2026-01-26
Started: 2025-10-31

Introduction
What will be covered in this tutorial? | Load the Libraries | What is Actigraphy? | Understanding Accelerometers and Gyroscopes | Accelerometers | Gyroscopes | On-Device Filtering and Data Acquisition | Signal Processing | Time Stamping and Time Zone Considerations | The Need for ActiGlobe | Getting Started with ActiGlobe | References
Rendered fromIntroduction.Rmdusingknitr::rmarkdown

Last update: 2026-01-26
Started: 2025-12-13

Time-Shift
What will be covered in this tutorial? | Load the Libraries | Load Example Data: FlyEast | Step 0. Create a brief summary of the recordings | Step 1: Look into a travel diary | Step 2: Adjust time change based on the travel diary
Rendered fromTime-Shift.Rmdusingknitr::rmarkdown

Last update: 2026-01-26
Started: 2025-10-31