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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "coevolve" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'coevolve: Fit Bayesian Generalized Dynamic Phylogenetic Models using ''Stan''
  or ''JAX'''
version: 1.2.1
identifiers:
- type: doi
  value: 10.32614/CRAN.package.coevolve
abstract: Fit Bayesian generalized dynamic phylogenetic models using 'Stan' or 'JAX'.
  The package allows an arbitrary number of variables with different response distributions
  to coevolve on a phylogenetic tree via an Ornstein-Uhlenbeck evolutionary process,
  allowing users to assess directionality between coevolving variables. The optional
  JAX backend enables high-performance sampling with NumPyro and potential GPU acceleration
  via 'reticulate'.
authors:
- family-names: Claessens
  given-names: Scott
  email: scott.claessens@gmail.com
  orcid: https://orcid.org/0000-0002-3562-6981
- family-names: Ringen
  given-names: Erik
  email: erikjacob.ringen@uzh.ch
  orcid: https://orcid.org/0000-0002-3565-6961
preferred-citation:
  type: article
  title: Trait coevolution and causal inference using generalized dynamic phylogenetic
    models
  authors:
  - family-names: Ringen
    given-names: Erik J
  - family-names: Claessens
    given-names: Scott
    email: scott.claessens@gmail.com
    orcid: https://orcid.org/0000-0002-3562-6981
  - family-names: Martin
    given-names: Jordan S
  - family-names: Jaeggi
    given-names: Adrian V
  journal: Methods in Ecology and Evolution
  volume: '17'
  issue: '6'
  year: '2026'
  publisher:
    name: Wiley Online Library
  start: '1818'
  end: '1836'
repository: https://ropensci-staging.r-universe.dev
repository-code: https://github.com/ScottClaessens/coevolve
commit: 52bdfcc1cf47a5f53adb7a181e2449318b524430
url: https://scottclaessens.github.io/coevolve/
date-released: '2026-06-23'
contact:
- family-names: Claessens
  given-names: Scott
  email: scott.claessens@gmail.com
  orcid: https://orcid.org/0000-0002-3562-6981